[Biopython-dev] Martel changes

[Andrew Dalke]

Brad:
>The only problem I noticed was that this broke Cayte's metatool
>parser since it used SignedInteger. I updated metatool to use Digits
>in place of Integer and Integer in place of SignedInteger. I think
>this is right based on reading your e-mails, and all tests pass now.

My apologies.  I was so concerned with getting Martel out that
I forgot to run the regression tests in biopython.

I checked and it seems that's the only use of Integer or
SignedInteger in the biopython release.

>Cayte, can you doublecheck and make sure I did the right thing? I
>don't want to break any of your code. I attached a diff with the
>changes I made.

Cayte answered this.  I concur, although I haven't run the
tests.

                    Andrew