Bioperl Reformatted HTML of FASTP Search Report
for P34529

Query= P34529 DEFINITION RecName: Full=Endoribonucle

Database: SampleLight.prot

Sequences producing significant alignments:	Score (bits)	E value
P34529 DEFINITION RecName: Full=Endoribonuclease dcr-1.	945.8	0

>P34529 DEFINITION RecName: Full=Endoribonuclease dcr-1.

Score = 945.8 bits (5045.3), Expect =
Identities = 800/800 (100%), Positives = 800/800 (100%)

Query: 551               MVRVRADLQCFNPRDYQVELLDKATKKNTIVQLGTGSGKTFIAVLLL 610
                                                                         
Sbjct: 1                                                                 60


Query: 611  KEYGVQLFAPLDQGGKRAFFVVEKVNLVEQQAIHIEVHTSFKVGQVHGQTSSGLWDSKEQ 670
                                   ::::::::::::::::::::::::::::::::::::: 
Sbjct: 61                          NSPIKHAIVLKNPMPNKKTAQMAVALEACRQLHLEGE 120


Query: 671  CDQFMKRHHVVVI             TAQCLLDLIRHAYLKIEDMCVLIFDECHHALGSQ 730
            :::::::::::::             :::::::::::::::::::::::::::::::::: 
Sbjct: 121  LDDNLLPKGRESI             AKLLEHIDEEPDEYAPGIAAKVGSSKRKQLYDKK 180


Query: 731  HPYRSIMVDYKLLKKDKPVPRVLGLTASLIKAKVAPEKLMEQLKKLESAMDSVIETASDL 790
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
Sbjct: 181  IARALNESFVEADKECFIYAFELERFREAELTLNPKRRKFEDPFNYEYCFGFLSAKEIPK 240


Query: 791  VSLSKYGAKPYEVVIICKDFEIGCLG             IPNFDTVIEIFDETVAFVNTT 850
            ::::::::::::::::::::::::::             ::::::::::::::::::::: 
Sbjct: 241  IPPFPVFLRQGNMKVRLIVAPKKTTV             TAAQLQEIQLFHNYLFTQVLQ 300


Query: 851  TEFHPDLDLDPRRPIKDSLKTTRAVFRQLGPWAAWRTAQVWEKELGKIIKSQVLPDKTLR 910
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
Sbjct: 301  MCKTGNLEFDGTSNAPLNTLIVPLNKRKDDMSYTINMKYVSEVVANMENMPRIPKDEVRR 360


Query: 911  FLNMAKTSMITIKRLLEPEMKKIKSIEALRPYVPQRVIR             LFEILETF 970
            :::::::::::::::::::::::::::::::::::::::             :::::::: 
Sbjct: 361  QYKFNAEDYKDAIVMPWYRNLEQPVFYYVAEILPEWRPS             SKFPDTHF 420


Query: 971  NPEFQKERMKLEKAEHLSAIIFVDQRYIAYSLLLMMRHIKSWEPKFKFVNPDYVVGASGR 1030
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
Sbjct: 421  ETFNEYFIKKYKLEIYDQNQSLLDVDFTSTRLNLLQPRIQNQPRRSRTVSNSSTSNIPQA 480


Query: 1031 NLASSDSQGLHKRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDR         1090
            ::::::::::::::::::::::::::::::::::::::::::::::::::::         
Sbjct: 481  SASDSKESNTSVPHSSQRQILVPELMDIHPISATLWNVIAALPSIFYRVNQL         540


Query: 1091      PLDMRSYVQSKGRARRAGSRYVITVEEKDTAAYCSKLPSDIFTRLVPHNQIIPIE 1150
                 ::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
Sbjct: 541       LLTDELRETILVKAFGKEKTKLDDNVEWNSLAYATEYEEKQTIIVKKIQQLRDLN 600


Query: 1151 ENGVTKYCAELLLPINSPIKHAIVLKNPMPNKKTAQMAVALEACRQLHLEGELDDNLLPK 1210
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
Sbjct: 601  QKSIEDQERETRENDKIDDGEELFNIGVWDPEEAVRIGVEISSRDDRMDGEDQDTVGLTQ 660


Query: 1211 GRESI             AKLLEHIDEEPDEYAPGIAAKVGSSKRKQLYDKKIARALNES 1270
            :::::             :::::::::::::::::::::::::::::::::::::::::: 
Sbjct: 661  GLHDG             NISDEDDELPFVMHDYTARLTSNRNGIGAWSGSESIVPSGWG 720


Query: 1271 FVEADKECFIYAFELERFREAELTLNPKRRKFEDPFNYEYCFGFLSAKEIPKIPPFPVFL 1330
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
Sbjct: 721  DWDGPEPDNSPMPFQILGGPGGLNVQALMADVGRVFDPSTASSSLSQTVQESTVSPPKQL 780


Query: 1331 RQGNMKVRLIVAPKKTTV             TAAQLQEIQLFHNYLFTQVLQMCKTGNLE 1390
            ::::::::::::::::::             ::::::::::::::::::::::::::::: 
Sbjct: 781  TKEEEQFKKLQNDLLKQA             KERLEALEMSEDMEKPRRLEDTVNLEDYG 840

Search Parameters

Search Statistics

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Revision: $Id$