[Bioperl-l] bp_download_query_genbank.pl

Fields, Christopher J cjfields at illinois.edu
Fri Jan 5 15:10:22 UTC 2018


Hi Tirza,

Apologies for the delayed reply, our mailing lists have had issues over the last several months due to a spamming attack.

Does this still give the same error?  My guess is a change on NCBI’s end is causing this, but I want to verify it.

Thanks,

chris

From: Bioperl-l <bioperl-l-bounces+cjfields=illinois.edu at mailman.open-bio.org> on behalf of Tirza Doniger <tirza at biomodel.os.biu.ac.il>
Date: Sunday, December 31, 2017 at 10:50 PM
To: "bioperl-l at mailman.open-bio.org" <bioperl-l at mailman.open-bio.org>
Subject: [Bioperl-l] bp_download_query_genbank.pl

Hi,

I'm running the bp_download_query_genbank.pl<http://bp_download_query_genbank.pl> :

bp_download_query_genbank.pl<http://bp_download_query_genbank.pl> --gi test -o gb_seqs.fa --format fasta

It isn't working....error is

"WebEnv parameter is required"

bioperl version: BioPerl-1.007002.tar.gz

Has anyone experienced this before?

Thanks,
Tirza
--
Tirza Doniger, Ph.D.
Bioinformatics Unit
The Mina and Everard Faculty of Life Sciences
Bar Ilan University
Phone: +972 3 531 8124
Cell: +972 52 530 8192
Email: Tirza.Doniger at biu.ac.il<mailto:Tirza.Doniger at biu.ac.il>
======================
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