[Bioperl-l] Whither Bio::FeatureIO?
George Hartzell
hartzell at alerce.com
Sun Aug 31 04:24:10 UTC 2014
Fields, Christopher J writes:
> Just a quick update on this: I released a separate Bio::FeatureIO
> release to CPAN that represents the code split out from the core
> modules:
>
> https://metacpan.org/pod/Bio::FeatureIO
>
> I had to do some cleanup to get code to work and tests passing with
> some sanity. A *lot* of things were not passing tests when we
> moved this over.
>
> This should represent what was last working with Chado though.
> However, I haven’t officially announced anything yet b/c I would
> like to shake bugs out of it. Can either of you try this out on a
> Chado run to make sure everything is up to snuff (or at least point
> out issues)? Time depending, I would like to get something running
> on (for instance) Travis-CI, maybe including some optional
> Chado-related stuff. This would also help so that we can work on
> merging what has been done on master so that these pass the same
> tests.
I can't do anything until Tuesday, but will be happy to run it through
the standard Chado build process when I get back to work.
Thanks for digging into it.
g.
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