[Bioperl-l] Fwd: bioperl errors

liz wright lzwright at gmail.com
Thu Mar 21 17:08:41 EDT 2013


Hi, I just force installed bioperl on ubuntu linux as this approach was
proposed as a viable alternative when certain tests fail, but I would like
to check that the fail errors listed below will not significantly impair
bioperl usage as I am new to all this and don't really know how to
interpret the error messages.  Thanks, Liz Wright


* WARNING: Configuration was initially created with Module::Build
  version '0.38' but we are now using version '0.4003'.
  If errors occur, you must re-run the Build.PL or Makefile.PL script.
Will try to install symlinks to /usr/local/bin
  CJFIELDS/BioPerl-1.6.1.tar.gz
  sudo ./Build install  -- OK
Failed during this command:
 LDS/AcePerl-1.92.tar.gz                      : make_test FAILED but
failure ignored because 'force' in effect
 KMACLEOD/libxml-perl-0.08.tar.gz             : make_test FAILED but
failure ignored because 'force' in effect
 TJMATHER/XML-DOM-1.44.tar.gz                 : make_test FAILED but
failure ignored because 'force' in effect
 MIROD/XML-DOM-XPath-0.14.tar.gz              : make_test FAILED but
failure ignored because 'force' in effect
 BJOERN/XML-SAX-Expat-0.40.tar.gz             : make_test FAILED but
failure ignored because 'force' in effect
 TODDR/XML-Parser-2.41.tar.gz                 : make NO
 MKUTTER/SOAP-Lite-0.715.tar.gz               : make_test FAILED but
failure ignored because 'force' in effect
 MIROD/XML-Twig-3.42.tar.gz                   : make_test FAILED but
failure ignored because 'force' in effect
 CJFIELDS/BioPerl-1.6.1.tar.gz                : make_test FAILED but
failure ignored because 'force' in effect


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