[Bioperl-l] Generate a hsp from emboss format?

Antony03 antony.vincent.1 at ulaval.ca
Mon Mar 18 07:43:30 EDT 2013


Hi,
I have a script who uses emboss (water) for a dynamic programming alignment.
Is this possible to generate (convert) my result in emboss format in a hsp
(blast) like.

I need (I think) an hsp format because it's much easier for parse only one
of the two strand in the alignment (and this is what I need).

Thanks!
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