[Bioperl-l] v1 updates, was Re: [Bioperl-guts-l] [bioperl/bioperl-live] a27ed2: dramatically improve performance when loading mult...

[Fields, Christopher J]

Just ran a separate v1-based branch to pull in commits since the v1 split that don't remove code, had ~30 or so commits I cherry-picked in, including Lincoln's.  Will test these and merge into v1, then we can push out an interim 1.6.x release.

chris

On Jul 11, 2013, at 2:57 PM, Jason Stajich <jason.stajich at gmail.com> wrote:

> yes, I mean merge from master to v1.
> I started to do this, but got sidetracked.  It should be easy enough, I don't think there has been much parallel changes, there seem to be about 4 commits to take a look at. I assume you are still going to release something off v1 before the new packages are unleashed?
> 
> Jason
> 
> On Jul 11, 2013, at 11:38 AM, "Fields, Christopher J" <cjfields at illinois.edu> wrote:
> 
>> Jason, do you mean to 'v1'?
>> 
>> chris
>> 
>> On Jul 11, 2013, at 12:16 PM, Jason Stajich <jason.stajich at gmail.com> wrote:
>> 
>>> Hi --
>>> 
>>> we need to merge lincoln's latest commits on main trunk to the stable branch too.
>>> 
>>> Jason
>>> 
>>> Begin forwarded message:
>>> 
>>>> From: GitHub <noreply at github.com>
>>>> Subject: [Bioperl-guts-l] [bioperl/bioperl-live] a27ed2: dramatically improve performance when loading mult...
>>>> Date: July 10, 2013 7:20:49 AM PDT
>>>> To: bioperl-guts-l at bioperl.org
>>>> Reply-To: GitHub <noreply at github.com>
>>>> 
>>>> Branch: refs/heads/master
>>>> Home:   https://github.com/bioperl/bioperl-live
>>>> Commit: a27ed2af318b099aa7814f2142e70082059183b6
>>>>   https://github.com/bioperl/bioperl-live/commit/a27ed2af318b099aa7814f2142e70082059183b6
>>>> Author: Lincoln Stein <lincoln.stein at gmail.com>
>>>> Date:   2013-07-10 (Wed, 10 Jul 2013)
>>>> 
>>>> Changed paths:
>>>> M Bio/DB/SeqFeature/Store/LoadHelper.pm
>>>> 
>>>> Log Message:
>>>> -----------
>>>> dramatically improve performance when loading multiple GFF3 files in same process
>>>> 
>>>> 
>>>> 
>>>> _______________________________________________
>>>> Bioperl-guts-l mailing list
>>>> Bioperl-guts-l at lists.open-bio.org
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>>> 
>>> Jason Stajich
>>> jason.stajich at gmail.com
>>> jason at bioperl.org
>>> 
>>> 
>>> _______________________________________________
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>> 
> 
> Jason Stajich
> jason.stajich at gmail.com
> jason at bioperl.org
>