[Bioperl-l] PhyloXML

[Hilmar Lapp]

On Feb 8, 2013, at 11:19 AM, Moretti Sébastien <sebastien.moretti at unil.ch> wrote:

> # Add annotation
> $treeio->add_phyloXML_annotation(-obj => $tree,
>                                -xml => '<name>SUMF family</name>',
>                               );

If you really have $treeio in your script in this line and not $tree, then that's at least one problem. But the stack suggests that the above isn't the exact line in your script - can you confirm that?

	-hilmar

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: Hilmar Lapp -:- Durham, NC -:- hlapp at drycafe dot net :
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