[Bioperl-l] Missing Bio/Root/Version.pm in bioperl-live

[Warren W. Kretzschmar]

Great, thanks.  I have merged the changes with v1 and added a pull request.

Warren


On Wed, Apr 10, 2013 at 5:47 PM, Fields, Christopher J <
cjfields at illinois.edu> wrote:

> Warren,
>
> Use the 'v1' branch; we're making some major changes on 'master' (moving
> chunks of code to separate repos).
>
> chris
>
> On Apr 10, 2013, at 10:41 AM, Warren W. Kretzschmar <wkretzsch at gmail.com>
> wrote:
>
> > Hi everybody,
> > I have updated Bio/SeqIO/msout.pm and a few test files and I am trying
> to
> > figure out what branch to merge against before submitting a pull request.
> > On commit ee8b48d583f07b575a0c77e7c458c687cbe97b11 When I build
> > bioperl-live using perl Build.PL, I get the error message in the
> > postcsript. Apparently Bio/Root/Version.pm is missing?
> >
> > Should I be merging against another branch instead?
> >
> > Regards,
> > Warren
> >
> > PS Here is the output from perl Build.PL
> > Checking prerequisites...
> >  recommends:
> >    *  Algorithm::Munkres is not installed
> >    *  Array::Compare is not installed
> >    *  Convert::Binary::C is not installed
> >    *  GD is not installed
> >    *  Graph is not installed
> >    *  GraphViz is not installed
> >    *  HTML::TableExtract is not installed
> >    *  Math::Random is not installed
> >    *  PostScript::TextBlock is not installed
> >    *  SOAP::Lite is not installed
> >    *  SVG is not installed
> >    *  SVG::Graph is not installed
> >    *  Set::Scalar is not installed
> >    *  Sort::Naturally is not installed
> >    *  Spreadsheet::ParseExcel is not installed
> >    *  XML::Parser::PerlSAX is not installed
> >    *  XML::SAX::Writer is not installed
> >    *  XML::Twig is not installed
> >
> > Checking optional features...
> > EntrezGene................disabled
> >  requires:
> >    ! Bio::ASN1::EntrezGene is not installed
> > MySQL Tests...............disabled
> >  requires:
> >    ! DBD::mysql is not installed
> > Pg Tests..................disabled
> >  requires:
> >    ! DBD::Pg is not installed
> >
> > ERRORS/WARNINGS FOUND IN PREREQUISITES.  You may wish to install the
> > versions
> > of the modules indicated above before proceeding with this installation
> >
> > Run 'Build installdeps' to install missing prerequisites.
> >
> > Can't find file Bio/Root/Version.pm to determine version at
> > /Library/Perl/5.12/Module/Build/Base.pm line 1193.
> > _______________________________________________
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>
>