[Bioperl-l] Writing bp_grep

Carnë Draug carandraug+dev at gmail.com
Sun May 13 09:58:57 EDT 2012


Hi everyone

I'm starting to write a grep tool for sequences (bp_grep). The idea is
to have something just like grep but for DNA and protein sequences
with most of the options that make sense in this context (print the
filename or sequence name only, position, without match search, count,
etc). I was wondering if anyone has any piece of code that could fit
in it or started something similar but just never finished.

Thanks,
Carnë




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