[Bioperl-l] Failed Test Installing BioPerl-1.6.901

Chris Fields cjfields at illinois.edu
Mon Mar 12 16:43:22 UTC 2012


Probably would need to use './Build testdb --test-files=t/SeqIO/SeqIO.t' 
(ironic caveat, untested :)

chris

On 03/12/2012 11:35 AM, Warren W. Kretzschmar wrote:
> Hey Leon,
> You'll need to get more information on the test that failed.  Here is
> how it usually works on UNIX:
>
> make testdb TEST_FILE=t/SeqIO/SeqIO.t
>
> to enter the debugger, then hit 'c' and enter to run through the
> program.  Let us know what you see.
>
> Cheers,
> Winni
> --
> In God we trust, all others bring data. - William Edwards Deming
>
>
>
> On Mon, Mar 12, 2012 at 3:06 PM, Leon Chen<leondott at gmail.com>  wrote:
>> Hi,
>>   I have met some problems in installing BioPerl-1.6.901.Test Summary
>> Report as Follows:
>>
>> ==========================================================
>> Test Summary Report
>> -------------------
>> t/SeqIO/SeqIO.t                            (Wstat: 256 Tests: 45 Failed: 1)
>>   Failed test:  45
>>   Non-zero exit status: 1
>> Files=349, Tests=22689, 143 wallclock secs ( 3.47 usr  0.77 sys + 129.74
>> cusr  7.47 csys = 141.45 CPU)
>> Result: FAIL
>> Failed 1/349 test programs. 1/22689 subtests failed.
>>   CJFIELDS/BioPerl-1.6.901.tar.gz
>>   ./Build test -- NOT OK
>> //hint// to see the cpan-testers results for installing this module, try:
>>   reports CJFIELDS/BioPerl-1.6.901.tar.gz
>> Running Build install
>>   make test had returned bad status, won't install without force
>> Failed during this command:
>>   CJFIELDS/BioPerl-1.6.901.tar.gz              : make_test NO
>> ==========================================================
>>
>> How to solve this Problem?Test In Ubuntu 10.04 LTS.
>> Thanks for help
>>
>> Yours
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