[Bioperl-l] Failed Test Installing BioPerl-1.6.901

Warren W. Kretzschmar wkretzsch at gmail.com
Mon Mar 12 12:35:37 EDT 2012


Hey Leon,
You'll need to get more information on the test that failed.  Here is
how it usually works on UNIX:

make testdb TEST_FILE=t/SeqIO/SeqIO.t

to enter the debugger, then hit 'c' and enter to run through the
program.  Let us know what you see.

Cheers,
Winni
--
In God we trust, all others bring data. - William Edwards Deming



On Mon, Mar 12, 2012 at 3:06 PM, Leon Chen <leondott at gmail.com> wrote:
> Hi,
>  I have met some problems in installing BioPerl-1.6.901.Test Summary
> Report as Follows:
>
> ==========================================================
> Test Summary Report
> -------------------
> t/SeqIO/SeqIO.t                            (Wstat: 256 Tests: 45 Failed: 1)
>  Failed test:  45
>  Non-zero exit status: 1
> Files=349, Tests=22689, 143 wallclock secs ( 3.47 usr  0.77 sys + 129.74
> cusr  7.47 csys = 141.45 CPU)
> Result: FAIL
> Failed 1/349 test programs. 1/22689 subtests failed.
>  CJFIELDS/BioPerl-1.6.901.tar.gz
>  ./Build test -- NOT OK
> //hint// to see the cpan-testers results for installing this module, try:
>  reports CJFIELDS/BioPerl-1.6.901.tar.gz
> Running Build install
>  make test had returned bad status, won't install without force
> Failed during this command:
>  CJFIELDS/BioPerl-1.6.901.tar.gz              : make_test NO
> ==========================================================
>
> How to solve this Problem?Test In Ubuntu 10.04 LTS.
> Thanks for help
>
> Yours
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> Bioperl-l at lists.open-bio.org
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