[Bioperl-l] Fwd: cds sequence extract

[Brian Osborne]

Liang Ma,

I'm forwarding this to the Bioperl mailing list.

If you're starting out with Bioperl I suggest you read this:

http://www.bioperl.org/wiki/HOWTO:Beginners

Brian O.


Begin forwarded message:

> From: maliang7121 <maliang7121 at 163.com>
> Date: September 12, 2011 2:20:20 AM EDT
> To: briano at bioteam.net
> Subject: cds sequence extract
> 
> Dear Brian:
> 
> I am a student of Chinese Academy of Sience, I begin to love bioperl, but now I have a problem.
> 
> According to the script of the attachment, I could easily dowload sequences from NCBI, now I need extract cds sequence from the genbank format files, and put them all in a single file using fasta format, I can not do it, could you spend a few minite wrinting a script for me?
> 
> Best!
> 
> Liang Ma
> 
> 
> 

Brian O.
--
Brian Osborne, PhD
BioTeam: http://bioteam.net
email: briano at bioteam.net
mobile: 978-317-3101

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