[Bioperl-l] Modules to read MEGA output and reproduce the phylogenetic tree
Roy Chaudhuri
roy.chaudhuri at gmail.com
Wed Nov 2 13:49:46 UTC 2011
MEGA can export trees in Newick format, which can be read by
Bio::TreeIO. The tree can be drawn in EPS format using
Bio::Tree::Draw::Cladogram. See:
http://www.bioperl.org/wiki/HOWTO:Trees
Roy.
On 02/11/2011 13:33, Dejian Zhao wrote:
> There are various packages on CPAN to cope with phylogenetic analysis. I
> wonder which module can read the output from other phylogenetic
> softwares, e.g. MEGA, and reproduce the phylogenetic tree. I want to
> produce a picture which combines the phylogenetic tree and the structure
> of each gene.
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