[Bioperl-l] install Bio::DB::BigWig ?

[Chris Fields]

Dan,

Was this using the latest kent src and Bio::DB::BigWig?

chris

PS : cc'ing gbrowse, which is where these seem to get answered a bit faster, context thread here: http://lists.open-bio.org/pipermail/bioperl-l/2011-March/034738.html

On Mar 28, 2011, at 3:12 PM, Dan Bolser wrote:

> Context, this patch in the distro's Build.PL fixes the errors with the
> tests, but doesn't fix the warnings.
> 
> On 28 March 2011 18:15, Dan Bolser <dan.bolser at gmail.com> wrote:
>> --- Build.PL~   2011-03-14 20:27:57.000000000 +0000
>> +++ Build.PL    2011-03-28 18:06:45.503757000 +0100
>> @@ -16,7 +16,7 @@
>>     dist_abstract      => "Manipulate Jim Kent's BigWig and BigBed
>> index files for genomic features.",
>>     license            => 'perl',
>>     include_dirs       => [$jk_include],
>> -    extra_linker_flags => ["$jk_lib/$LibFile",'-lz'],
>> +    extra_linker_flags => ["$jk_lib/$LibFile",'-lz','-lssl'],
>> 
>>     extra_compiler_flags=>[
>>        # turn off warnings originating in Perl's Newx* calls
> 
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