[Bioperl-l] nucleotide changes along tree

Nicholas Price price4890 at gmail.com
Mon Jan 31 16:30:35 UTC 2011


Hi

I have  three nucleotide sequences from human, chimp and Orangutan and
the corresponding tree.I want align the sequences and for each column
in the alignment where there are substitutions, I want to infer on
which branches the changes occurred using a maximum likelihood method.
Is there a way to do this in Bioperl??

thank you

Nicholas



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