[Bioperl-l] bio::Db::sam bioperl version

Maria elena Sana snamln at unife.it
Mon Feb 21 20:25:41 UTC 2011


Hi All,
I'm using a perl script with Bioperl /Bio:DB::Sam object but it runs
differently on two server on which there are two different perl
version (5.8.8 and 5.10.1 respectively). On the first machine on which
there is the 5.8.8 perl version, the script runs correctly, on the
second it doesn't return errors but doesn't work perfectly. Any
elucidation?
I have specifically problem with calculation of query position in pileup
routine (Bio::DB::Bam::PILEUP)
Thanx a lot

-- 
Dott.ssa Maria Elena Sana
Università di Ferrara
Dipartimento di Morfologia ed Embriologia
Via Fossato di Mortara, 70
(Viale Eliporto presso CUBO)
44121 - Ferrara
Italy Phone 0532-455851
Mail mariaelena.sana at unife.it




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