[Bioperl-l] extract overhangs from Clustalw

[Jordi Durban]

What do you mean by "overhangs"?
Have ypu heard about Extending Bio::Tools::Run::Clustalw?
hope this helps.
2011/2/14 Rondon Neto <rondonbio at yahoo.com.br>

> How to extract overhangs from Clustalw alignments and return the aln file
> without the overhangs? I'm trying to use Bio::AlignIO, but Im confused.
> Thank you very much.
>
> Rondon
>
>
>
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-- 
Jordi