[Bioperl-l] fastq quality with initial @

[Chris Fields]

On Aug 2, 2011, at 12:29 PM, Jack Tanner wrote:

> 
> i've got a fastq file with PHRED quality strings that sometimes start with '@'. this breaks the _index_file routine in Bio/Index/Fastq.pm.
> i would've filed this in bugzilla, but i'm not authorized to do that.

We no longer use bugzilla (as of v 1.6.900); see here:

http://www.bioperl.org/wiki/Bugs

Just register for an account and submit.  I would check the latest code before doing so, just in case it has been fixed.

chris