[Bioperl-l] [ANNOUNCEMENT] BioPerl 1.6.9 released

[Jason Stajich]

Excellent news Chris - thanks for the hard work!

-jason
On Apr 14, 2011, at 1:56 PM, Dave Messina wrote:

> Thanks, Chris! This is a PumpKing Extraordinaire, everybody. Give it up.
> 
> 
> Dave
> 
> 
> 
> 
> 
> On Thu, Apr 14, 2011 at 22:14, Robert Buels <rmb32 at cornell.edu> wrote:
> 
>> Hurray!  Chris, you are tremendous.  Seriously.
>> 
>> Rob
>> 
>> 
>> 
>> On 04/14/2011 12:57 PM, Chris Fields wrote:
>> 
>>> All,
>>> 
>>> BioPerl 1.6.9 is now available in CPAN.  In this release:
>>> 
>>> * Refactored Bio::Species/Bio::Tree
>>> * New SeqIO modules (gbxml, msout, mbsout)
>>> * Updates for perl 5.12
>>> * Bio::Assembly support for SAM/BAM, Newbler, ace output
>>> * Bio::DB::SeqFeature updates
>>> * PAML updated to work with v. 4.4d
>>> * lots of various bug fixes, around 50
>>> 
>>> Just to note, this is the first release after I reworked the Build.PL
>>> system, so we will probably hit a few speed bumps along the way.  This is in
>>> effort to simplify the process for further work this summer on modularizing
>>> BioPerl, but it also makes new releases much easier to make.  In particular,
>>> this has only been tested on Ubuntu Linux and Mac OS X (no Windows testing
>>> has occurred yet).    Please post if there are any problems.
>>> 
>>> Enjoy!
>>> 
>>> chris
>>> 
>>> 
>>> 
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>>> http://lists.open-bio.org/mailman/listinfo/bioperl-l
>>> 
>>> 
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