[Bioperl-l] Parsing by organism

[shalabh sharma]

Hey Juan,
           When you parse your blast file and to get description you use
$hit->description.
That field contains information about the organism (in the square brackets ,
[....]), there you can have a condition for a particular organism.

-Shalabh


On Tue, Jun 29, 2010 at 2:18 PM, Juan Jovel <jovel_juan at hotmail.com> wrote:

>
> Hello Everybody!
>
> When using  SearchIO to parse BLAST reports, is it possible to extract only
> hits belonging to an specific organism?  If yes, how?
>
> Thanks in advance,
>
> JUAN
>
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