[Bioperl-l] Inherent graph on classes in Bio::Search?

[Peng Yu]

There are many classes defined in Bio::Search, which is confusing to
new users. Is there an inherentance graph and a dependency graph to
help new users understand how they work?

http://search.cpan.org/~cjfields/BioPerl-1.6.1/Bio/Search/HSP/GenericHSP.pm

For example, Bio::Search::HSP::GenericHSP is an implementation of
Bio::Search::HSP::HSPI (if I'm correct), which is documented in the
text. But I feel it would be much easier to see this relationship, if
this is drawn graphically.

-- 
Regards,
Peng