[Bioperl-l] sim4cc vs sim4

[Jason Stajich]

sending an example can help -- I guess the formats are different enough 
that the parser doesn't work.  Why people don't just generate a GFF or 
simple tab format when they write a new tool, I don't know....

-jason

Jeff S Kittrell wrote:
>
> Has anyone used the sim4 file parser on a sim4cc? When I parse the 
> file with SearchIO(-format => 'sim4') or Bio::Tools::Sim4::Results the 
> query string returns a null. I assume there is some slight difference 
> between the two file formats? Any help is appreciated.
>
> Jeff
>
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