[Bioperl-l] Bioperl-l Digest, Vol 82, Issue 28

Smithies, Russell Russell.Smithies at agresearch.co.nz
Thu Feb 18 22:12:12 UTC 2010


http://hgdownload.cse.ucsc.edu/admin/jksrc.zip


> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org [mailto:bioperl-l-
> bounces at lists.open-bio.org] On Behalf Of Dan Kortschak
> Sent: Friday, 19 February 2010 10:43 a.m.
> To: MEC at stowers.org
> Cc: bioperl-l at lists.open-bio.org
> Subject: Re: [Bioperl-l] Bioperl-l Digest, Vol 82, Issue 28
> 
> Hi Malcolm,
> 
> It is not entirely obvious where the Kent utilities are available from
> the genome wiki page (I can find a closed svn repo with the source, but
> no other sites). Would you point me to a download site?
> 
> thanks
> Dan Kortschak
> 
> On Thu, 2010-02-18 at 12:00 -0500, bioperl-l-request at lists.open-bio.org
> wrote:
> > some pointers
> >
> > http://code.google.com/p/bedtools/
> > http://genomewiki.ucsc.edu/index.php/Kent_source_utilities such as
> > overlapSelect
> >
> >
> > Malcolm Cook
> > Stowers Institute for Medical Research -  Bioinformatics
> > Kansas City, Missouri  USA
> 
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