[Bioperl-l] BlastPlus proactive fix

Mark A. Jensen maj at fortinbras.us
Fri Feb 12 18:48:09 UTC 2010


All-
With revision 16384, your StandAloneBlastPlus object
will retrieve additional blast results using

 $result = $bp_factory->blastn( -query => [$this_seq, $that_seq], -db => 'mydb' );
 # do something with this_seq result
 $result = $bp_factory->next_result;
 # do something with that_seq result

and you may also

 $bp_factory->rewind_results;
 while (my $result = $bp_factory->next_result) {
   ..
 }

happy coding, MAJ



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