[Bioperl-l] Any module for chromosome region analysis ?

[Dan Kortschak]

Hi Shameer,

The RUNTools bioperl module will do this for you using the 'merge'
command.

Dan

On Thu, 2010-02-25 at 07:35 -0500, bioperl-l-request at lists.open-bio.org
wrote:
> Hello all,
> 
> I am looking for a standard way / bioperl module that can take up
> different chromosome regions (in basepairs) and give the unique and
> common
> regions.
> For example these are the regions and I need to get the common regions
> (start - end) among all 5 regions:
> 24328000 - 29166946
> 25388351 - 27114603
> 22310186 - 25239677
> 28511024 - 29638159
> 23729632 - 26385029
> 
> Thanks,
> Shameer