[Bioperl-l] load_seqdatabase.pl
    Krzysztof Sarapata 
    mysarapa at cyf-kr.edu.pl
       
    Tue Feb 16 12:03:25 EST 2010
    
    
  
Hi
I've loaded GenBank file into bioSQL structure with "load_seqdatabase.pl" script. 
Is it correct that each entity (qualifier) from FEATURES even "db_xref"  e.g.
 
FEATURES             Location/Qualifiers
     source          1..257719
                     /organism="Homo sapiens"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     .....
                    /db_xref="GeneID:100287102"
 
is put into  "Seqfeature Qualifier Value" table, if we have exactly table "Dbxref"?
Why value of this qualifier (db_xref) isn't put into "Dbxref" table?
With regards
Krzysztof Sarapata
    
    
More information about the Bioperl-l
mailing list