[Bioperl-l] Could I install BioPerl on Windows with the ActivePerl 5.12.1?

Christopher Fields cjfields1 at gmail.com
Thu Aug 19 17:20:32 UTC 2010


cc'ing list.  Looks like the BioPerl PPM is possibly broken for perl 5.12.  Shouldn't be too hard to fix, but apparently there are a lot of missing packages. Troubling...

chris

On Aug 19, 2010, at 11:29 AM, han sun wrote:

> v5.10 works,thanks.
> 
> 2010/8/19 Christopher Fields <cjfields1 at gmail.com>
> Try using ActivePerl 5.10 instead of v5.12.  It's very possible the PPM won't work for v5.12 yet.
> 
> chris
> 
> On Aug 19, 2010, at 9:25 AM, han sun wrote:
> 
> > Hello everyone,
> >
> > I have used perl for several months,and I now want to feel the power of
> > bioperl.
> > But it seems that the installing is more difficult than I thought.
> >
> > I typed the commands.
> >
> >
> >
> > install-shell
> >
> >
> > rep add bioperl http://bioperl.org/DIST
> >
> >
> > rep add uwinnipeg
> > http://cpan.uwinnipeg.ca/PPMPackages/12xx/<http://cpan.uwinnipeg.ca/PPMPackages/10xx/>
> >
> >
> > rep add trouchelle http://trouchelle.com/ppm12/
> >
> > install BioPerl
> >
> > However,the installing failed,
> >
> > ppm install failed:
> > Can't find any package that provides List::MoreUtils for Bundle-BioPerl-Core
> > Can't find any package that provides PostScript::TextBlock for
> > Bundle-BioPerl-Core
> > Can't find any package that provides Ace:: for Bundle-BioPerl-Core
> > Can't find any package that provides SOAP::Lite for Bundle-BioPerl-Core
> > Can't find any package that provides Convert::Binary::C for
> > Bundle-BioPerl-Core
> > Can't find any package that provides XML::Twig for Bundle-BioPerl-Core
> > Can't find any package that provides DB_File:: for Bundle-BioPerl-Core
> > Can't find any package that provides IPC::Run for GraphViz
> > Can't find any package that provides XML-XPathEngine for XML-DOM-XPath
> > Can't find any package that provides List-MoreUtils for Moose
> > Can't find any package that provides List-MoreUtils for Class-MOP
> >
> >
> > then I tried
> >
> > install http://www.bribes.org/perl/ppm/GD.ppd
> >
> > and tried the installation again,but it still didn't help.
> >
> > *
> > *
> > *
> > *
> > *
> > *
> >
> >
> > *Do you konw what's wrong with the problem?*
> > *
> > *
> > *
> > *
> > *Please help me,thanks very much.*
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/bioperl-l
> 
> 





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