[Bioperl-l] Problems getting bioperl to run on SnowLeopard
Mgavi Brathwaite
lsbrath at gmail.com
Fri Apr 9 17:29:25 EDT 2010
Hello,
I am having trouble running bioperl-1.6.1 in SnowLeopard. I have moved the
BIoPerl-1.6.1 folder to /System/Library/Perl/5.10.0/. I logged in as su
and added export PERL5LIB = /System/Library/Perl/5.10.0/BioPerl-1.6.1/Bio/
to my .profile file. When I run my script I get the following error
message:
Can't locate Bio/SeqIO.pm in @INC (@INC contains: /sw/lib/perl5
/sw/lib/perl5/darwin /Library/Perl/Updates/5.10.0
/System/Library/Perl/5.10.0/darwin-thread-multi-2level
/System/Library/Perl/5.10.0 /Library/Perl/5.10.0/darwin-thread-multi-2level
/Library/Perl/5.10.0 /Network/Library/Perl/5.10.0/darwin-thread-multi-2level
/Network/Library/Perl/5.10.0 /Network/Library/Perl
/System/Library/Perl/Extras/5.10.0/darwin-thread-multi-2level
/System/Library/Perl/Extras/5.10.0 .) at project_example.pl line 4.
BEGIN failed--compilation aborted at project_example.pl line 4.
Can anyone help me get up and running?
Mgavi
More information about the Bioperl-l
mailing list