[Bioperl-l] Regarding Bio::TreeIO Object

Jason Stajich jason at bioperl.org
Mon Nov 16 17:34:57 UTC 2009


Is this at all helpful to your questions.
http://www.bioperl.org/wiki/HOWTO:Trees

The trees are in 'newick' or new hampshire format though I don't think  
there is a phylip format for trees.

-jason
On Nov 15, 2009, at 11:00 PM, Aneesh K wrote:

> Hi,
>
> I just started to use Bioperl modules. It's really useful and  
> interesting.
> Now I have in stuck with "Tree objects and phylogenetic trees".
> I couldn't get any documentation/examples about reading/parsing  
> phylip tree
> files.
>
> Please tell me from where I can get some sample codes for this.
>
> Waiting for your reply.
>
> Thanks
> Aneesh.K
> Mob. 09646181517
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> Bioperl-l at lists.open-bio.org
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--
Jason Stajich
jason.stajich at gmail.com
jason at bioperl.org




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