Many thanks to Ewan Birney et. al. for Bio::Index::*
I can throw away my awful grep based index-by-accession stuff. :)
Any chance someone has also written an organism based index mechanism?
Something like...
while (my $seq = $inx−>get_Seq_by_organism('*Xanthomonas*')) {
print $seq->display_id . "\n";
}
Thanks,
j