[Bioperl-l] GenBank entries

Mark A. Jensen maj at fortinbras.us
Wed May 20 15:51:59 UTC 2009


Shalabh- I think you want to look at 
http://www.bioperl.org/wiki/HOWTO:EUtilities_Cookbook
specif.
http://www.bioperl.org/wiki/HOWTO:EUtilities_Cookbook#Get_GIs_for_a_list_of_accessions
and then
http://www.bioperl.org/wiki/HOWTO:EUtilities_Cookbook#Get_accessions_.28as_well_as_other_information.29_for_a_list_of_GIs
MAJ
----- Original Message ----- 
From: "shalabh sharma" <shalabh.sharma7 at gmail.com>
To: "bioperl-l" <Bioperl-l at lists.open-bio.org>
Sent: Wednesday, May 20, 2009 11:27 AM
Subject: [Bioperl-l] GenBank entries


> Hi,
>     Is there any way i can get a complete genBank entry for a corresponding
> accession number?
> I have a list of Accession number and i want locus_tag for those ids. I am
> thinking of getting complete genBank entry for those ids and then parse them
> to get locus_tag.
> Is there any easy way to do it (like directly accession to locus_tag.
>
> Thanks
> Shalabh
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>
> 




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