[Bioperl-l] looks like a Bio::SeqIO error
fungazid
fungazid at yahoo.com
Fri May 15 18:06:52 UTC 2009
Ok, thank you all very very much,
The problems were solved completely:
1) Bioperl 1.6 was installed (just needed to install XML-SAX)
2) after changing '-format' to 'Fasta' instead of 'largefasta', all problems
were gone.
my $seqin = Bio::SeqIO->new('-format'=>'Fasta','-file'=>$file1);
LOOP1: while ( my $seqobj1 = $seqin->next_seq())
{ ....
--
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