[Bioperl-l] Alignment->slice() issue?

Cook, Malcolm MEC at stowers.org
Tue Jun 16 20:13:33 UTC 2009


Chris!

erm, yeah, I do....

... and I will schedule some time to code up a test and add it to AlignI's suite....

Malcolm
  

> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org 
> [mailto:bioperl-l-bounces at lists.open-bio.org] On Behalf Of 
> Chris Fields
> Sent: Tuesday, June 16, 2009 2:08 PM
> To: Malcolm Cook
> Cc: bioperl-l at lists.open-bio.org
> Subject: Re: [Bioperl-l] Alignment->slice() issue?
> 
> Sounds to me like a BioPerl bug.  Do you have some example 
> data demonstrating the problem?
> 
> chris
> 
> On Jun 16, 2009, at 3:06 AM, Malcolm Cook wrote:
> 
> > Kevin,
> >
> > I'm getting struck by this old issue you once coded around.
> >
> >      http://bioperl.org/pipermail/bioperl-l/2007-January/024665.html
> >
> > Any chance you could share your implementation with  fellow 
> > traveller...
> >
> > ??
> >
> > Thanks,
> >
> > Malcolm Cook
> > Stowers insitute for Medical research
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/bioperl-l
> 
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