[Bioperl-l] ubuntu installation
Mark A. Jensen
maj at fortinbras.us
Thu Jul 23 00:23:09 UTC 2009
Bioperl-max ( my public VM on Amazon ) is Ubuntu Hardy--
I set up everything (live, db, tools, biosql) from an svn checkout
of the various trunks, and built by
'perl Build.PL; ./Build ; ./Build test; ./Build install'.
(Also needed to apt-get svn; no problem.)
Worked fine. If Dazhi wants a particular release, he could
check out a release tag instead of trunk. More info at
http://www.bioperl.org/wiki/Using_Subversion
MAJ
----- Original Message -----
From: "Hilmar Lapp" <hlapp at gmx.net>
To: "BioPerl List" <bioperl-l at lists.open-bio.org>
Cc: "Dazhi Jiao" <dazhi.jiao at gmail.com>
Sent: Wednesday, July 22, 2009 8:03 PM
Subject: [Bioperl-l] ubuntu installation
> Apparently when you say "apt-get install bioperl" on Ubuntu you get the 1.5.2
> release. I don't know anything about BioPerl packaging on Ubuntu but thought
> I'd check whether someone who knows (or who maintains that package?) is here
> and can offer some advice or comment?
>
> See
> http://phylr-gsoc.blogspot.com/2009/07/setting-up-biosql-101-on-postgresql-83.html
> Dazhi is one of our Google Summer of Code students.
>
> -hilmar
>
> --
> ===========================================================
> : Hilmar Lapp -:- Durham, NC -:- hlapp at gmx dot net :
> ===========================================================
>
>
>
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