[Bioperl-l] About to tag the last RC...

[Brian Osborne]

Chris & Dave,

Just a note to say that I haven't seen this "Couldn't call  
new_from_registry() on [Bio::DB::Flat]" message in my tests of RC3,  
with or without networking. This was Dave testing RC2. Did you fix  
this in RC3 Chris?

Brian O.


On Jan 14, 2009, at 4:53 AM, Dave Messina wrote:

> t/LocalDB/Registry.............................1/14
> --------------------- WARNING ---------------------
> MSG: Couldn't call new_from_registry() on [Bio::DB::Flat]
>
> ------------- EXCEPTION: Bio::Root::Exception -------------
> MSG: you must specify an indexing scheme
> STACK: Error::throw
> STACK: Bio::Root::Root::throw Bio/Root/Root.pm:357
> STACK: Bio::DB::Flat::new Bio/DB/Flat.pm:160
> STACK: Bio::DB::Flat::new_from_registry Bio/DB/Flat.pm:252
> STACK: Bio::DB::Registry::_load_registry Bio/DB/Registry.pm:164
> STACK: Bio::DB::Registry::new Bio/DB/Registry.pm:95
> STACK: t/LocalDB/Registry.t:51
> -----------------------------------------------------------
>
> ---------------------------------------------------
> t/LocalDB/Registry.............................ok