[Bioperl-l] Counting Homopolymer regions

[Abhishek Pratap]

Hello All


Is there a quick way to find the homopolymer stretches in the contigs and
also report their base start and end positions.

Thanks,
-Abhi

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Abhishek Pratap
Bioinformatics Software Engineer
Institute for Genome Sciences
School of Medicine, Univ of Maryland
801, W. Baltimore Street, Baltimore, MD 21209
Ph: (+1)-410-706-2296
www.igs.umaryland.edu/

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