[Bioperl-l] about BioPerl DB module

=?gb2312?q?=D4=C6=20=BA=CE?= jarodpardon at yahoo.com.cn
Tue Jan 20 20:11:51 EST 2009


Hi, all
I have some sequence databases such as RefSeq in flat
GenPept/GenBank format, 
while there is a list of GI number and I want extract
the sequence from the 
database according to the GI number. How should I do?
Using Bio::DB::Flat module to index the database? But
there is no method 
called get_Seq_by_gi() in that module.

Best,

Jarod


      ___________________________________________________________ 
  ºÃÍæºØ¿¨µÈÄã·¢£¬ÓÊÏäºØ¿¨È«ÐÂÉÏÏߣ¡ 
http://card.mail.cn.yahoo.com/



More information about the Bioperl-l mailing list