[Bioperl-l] Issues with loading BioPerl-1.6.0 on to my Mac

Brian Osborne bosborne11 at verizon.net
Mon Dec 14 19:45:35 UTC 2009


Mgavi,

So there's a directory called /sw/lib/perl5/Bio? Or is it called  
something else?

Brian O.


On Dec 14, 2009, at 2:41 PM, Mgavi Brathwaite wrote:

> Hello,
>
> I have loaded BioPerl -1.6.0 onto my Mac. When I run my script I get  
> the
> following error message:
>
> Can't locate Bio/SeqIO.pm in @INC (@INC contains: /sw/lib/perl5
> /sw/lib/perl5/darwin /System/Library/Perl/5.8.8/darwin-thread- 
> multi-2level
> /System/Library/Perl/5.8.8 /Library/Perl/5.8.8/darwin-thread- 
> multi-2level
> /Library/Perl/5.8.8 /Library/Perl
> /Network/Library/Perl/5.8.8/darwin-thread-multi-2level
> /Network/Library/Perl/5.8.8 /Network/Library/Perl
> /System/Library/Perl/Extras/5.8.8/darwin-thread-multi-2level
> /System/Library/Perl/Extras/5.8.8 /Library/Perl/5.8.6 /Library/Perl/ 
> 5.8.1 .)
> at project_example.pl line 4.
> BEGIN failed--compilation aborted at project_example.pl line 4.
>
> I moved the BioPerl dir to /sw/lib/perl5 and I still get the error  
> message.
> Any ideas?
>
> MEB
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