[Bioperl-l] NCBI BlastPlus wrapper for your enjoyment

[Mark A. Jensen]

Hi All, 

Your full-service BLAST wrapper, Bio::Tools::Run::StandAloneBlastPlus,
is at beta in the bioperl-run trunk. It wraps all the programs of the 
NCBI's new blast+-2.2.22 suite 
ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/
and integrates them, allowing you to create, mask, and query 
databases from within a single factory object. See the HOWTO
http://www.bioperl.org/wiki/HOWTO:BlastPlus
for the usual usage and implementation details.

Happy coding--
MAJ