[Bioperl-l] how to map ensembl id to NCBI gi

[Chris Fields]

Tom,

Probably best to do this via BioMart:

http://www.ensembl.org/biomart/

I would assume you can also do this via the ensembl perl API as well.

Also, have a look at the UniProt ID Mapper:

http://www.uniprot.org/?tab=mapping

chris

On Dec 9, 2009, at 6:36 PM, Tom Keller wrote:

> Greetings,
> Is there a simple way to map a list of ensembl ids to the NCBI gis?
> 
> thanks,
> Tom
> 
> Thomas (Tom) Keller
> kellert at ohsu.edu
> 503.494.2442
> 6339b R Jones Hall (BSc/CROET)
> www.ohsu.edu/xd/research/research-cores/dna-analysis/
> 
> 
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