[Bioperl-l] bioperl capability

Chris Fields cjfields at illinois.edu
Tue Aug 18 14:35:49 UTC 2009


I think I already answered this:

http://thread.gmane.org/gmane.comp.lang.perl.bio.general/20302/focus=20305

chris

On Aug 14, 2009, at 2:02 PM, David Quan wrote:

> Hello,
>
>        I've been browsing around bioperl documentation and have used
> a blast parser, but am wondering if it is possible to use the start
> and end information for a hit to trace back to a gene in genbank and
> extract the sequence for that gene?  I have not been able to find
> elements that would work in such a way.  Recommendations for elements
> that would be capable of behaving in such a way would be greatly
> appreciated.  Thanks very much.
>
> David N. Quan
> -- 
> Love of country is, at heart, trust in a nation's people, faith in
> their better nature, esteem for their best hopes, understanding for
> the magnificence and the distinctiveness and the huge, infinitely
> shaded cultural palette of their simple humanity.    --Bradley Burston
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