[Bioperl-l] Access GSS sequences using Bio::DB::GenBank

michael watson (IAH-C) michael.watson at bbsrc.ac.uk
Wed Aug 5 13:50:35 UTC 2009


Hi

I want to download GSS sequences using Bio::DB::GenBank.

When I specify db => 'nucleotide', it gets the 3000 or so that Entrez reports are in nucleotide, but there are another ~30000 in GSS that I want, but when I try db => 'GSS' or db => 'gss' nothing comes down.

I'm using bioperl 1.5.1.

Any clues?

Mick






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