[Bioperl-l] truncating a sequence and remapping annotations

[Robert Buels]

Hi all,

Recently a user came into #bioperl looking to truncate an annotated 
sequence (leaving the region between e.g. 150 to 250 nt), and have the 
annotations from the original sequence be remapped onto the new 
truncated sequence.

Poking through code, I came across an undocumented function trunc() that 
from the comments looks like it was written by Jason as part of a master 
plan to implement this very functionality.

Just wondering, what's the status of that?

Rob

-- 
Robert Buels
Bioinformatics Analyst, Sol Genomics Network
Boyce Thompson Institute for Plant Research
Tower Rd
Ithaca, NY  14853
Tel: 503-889-8539
rmb32 at cornell.edu
http://www.sgn.cornell.edu