[Bioperl-l] Access Uniprot detailed information

[Brian Osborne]

Markus,

There is some discussion of the structure of "swiss" format files in  
the Feature-Annotation HOW TO. Have you taken a look at this?

http://www.bioperl.org/wiki/HOWTO:Feature-Annotation#Other_Sequence_File_Formats

This section does not explain all the fields in each different format,  
but it shows you code that you can run that will print out all the  
annotations and features.

You're really asking 2 questions, I think. Have you figured out how to  
retrieve a sequence? See if this helps you:

http://www.bioperl.org/wiki/HOWTO:Beginners#Retrieving_a_sequence_from_a_database


Brian O.


On Apr 8, 2009, at 10:07 AM, manni122 wrote:

>
> Hi there,
> maybe I am not able to read careful enough through the Howto section.
> But is there a function in BioPerl that retrieves for a given  
> Uniprot Access
> Code or ID from the Uniprot Database some general annotations like  
> enzymatic
> activity or literature references?
> I appreciate any help!
> -- 
> View this message in context: http://www.nabble.com/Access-Uniprot-detailed-information-tp22951210p22951210.html
> Sent from the Perl - Bioperl-L mailing list archive at Nabble.com.
>
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