[Bioperl-l] Withdraw Bio::Graphics and Bio::DB::SeqFeature from bioperl distribution?
Sendu Bala
bix at sendu.me.uk
Mon Nov 10 23:46:52 UTC 2008
Lincoln Stein wrote:
> - Bio::Perl -- the core distribution, containing Bio::Root, Bio::Seq,
> BioSeqFeature, Bio::SeqIO and Bio::Annotation
> - Bio::Align -- alignment support
> - Bio::Ontology -- ontology support
> - Bio::Microarray -- microarray support
> - Bio::PopGen -- population genetics
> - Bio::SeqEvolution -- evolutionary biology
> - Bio::Structure -- structures
> - Bio::Tree -- trees
>
> I wonder how many interdependencies there are to disentangle?
See discussion here:
http://thread.gmane.org/gmane.comp.lang.perl.bio.general/16631/focus=16816
(Once again I use Bio:Graphics as an example during the discussion -
popular modules! ;) )
I never made an attempt to disentangle it myself, but hey - pretty
picture! :)
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