[Bioperl-l] Bio::Assembly tests failing
Chris Fields
cjfields at illinois.edu
Tue Nov 25 12:31:27 EST 2008
I am getting tests failing on svn trunk (bioperl-live) that appear
related to Bio::Assembly changes. Florent, can you take a look at
these?
chris
1..4
ok 1 - use Bio::Assembly::IO;
ok 2 - Testing to see if the first contig is a Contig isa
Bio::Assembly::Contig
not ok 3 - Testing to see if the first singlet is a Singlet isa
Bio::Assembly::Singlet
not ok 4 - Testing to see if the Singlet ISA Contig isa
Bio::Assembly::Contig
# Failed test 'Testing to see if the first singlet is a Singlet isa
Bio::Assembly::Singlet'
# at t/singlet.t line 25.
# Testing to see if the first singlet is a Singlet isn't defined
# Failed test 'Testing to see if the Singlet ISA Contig isa
Bio::Assembly::Contig'
# at t/singlet.t line 27.
# Testing to see if the Singlet ISA Contig isn't defined
# Looks like you failed 2 tests of 4.
Dubious, test returned 2 (wstat 512, 0x200)
Failed 2/4 subtests
Test Summary Report
-------------------
t/singlet.t (Wstat: 512 Tests: 4 Failed: 2)
Failed tests: 3-4
Non-zero exit status: 2
Files=1, Tests=4, 1 wallclock secs ( 0.01 usr 0.01 sys + 0.26 cusr
0.04 csys = 0.32 CPU)
Result: FAIL
Failed 1/1 test programs. 2/4 subtests failed.
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