[Bioperl-l] Re trieving all genes of a species from DBBJ/GENBANK using Perl SOAP

[Chris Fields]

Tomas,

Not sure if this is related to bioperl specifically.  Is there any  
particular you are using DDBJ over EMBL or GenBank?

I would probably go about this using Bio::DB::GenBank,  
Bio::DB::EntrezGene, or similar in combination with a GenBank query  
(Bio::DB::Query::GenBank); see the relevant module POD for details.

chris

On Nov 16, 2008, at 9:58 AM, tomas_bar wrote:

>
> Hi,
> I’m using Perl to query DBBJ using SOAP.
> I want to find all genes of  a given species in the database.
> However, the different SOAP services available like GetEntry only  
> allow you
> to retrieve records by accession number.
> Do you know how I could find all genes of a species?
> Thank you very much.
>
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