[Bioperl-l] problem with SearchIO and writer

[Diego Mauricio Ria–ño Pachó—n]

Dear all,

I have a small problem parsing a BLAST report with SearchIO and using 
TextResultWriter.

I have a large file with several BLAST results, I instantiate SearchIO as:

my $searchio = new Bio::SearchIO ('-format' => 'blast', '-file' => 
"$blastFile");

##then I extract each individual report as
while (my $result = $searchio->next_result){
   my $writertxt = Bio::SearchIO::Writer::TextResultWriter->new();
   my $blastresult=$writertxt->to_string($result);
   while (my $hit = $result->next_hit){
     print $hit->name."\n";
   }
}
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