[Bioperl-l] Install help errors

Sendu Bala bix at sendu.me.uk
Tue Jul 8 20:24:54 UTC 2008


snoze pa wrote:
> Here is the error message
> 
> ---------------------------------------------------
> Could not store P21215:
> ------------- EXCEPTION: Bio::Root::Exception -------------
> MSG: The supplied lineage does not start near 'Clostridium sp.' (I was
> supplied 'sp. ATCC29733 | Clostridium | Clostridiaceae | Clostridiales
> | Clostridia |Firmicutes | Bacteria')

This problem (in BioPerl) was only fixed quite recently, so you'll have 
to use the very latest BioPerl from SVN:

http://www.bioperl.org/DIST/nightly_builds/bioperl-live.tar.gz



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